Hi,Mark,
Thank you very much for your answer. In this case , if I want to know
about the protein structure(like bonding, angles...), Is there any method I can
use please? The difficult part in this question may be that I have more than
one proteins in the same output file(GRO), I know some tcl script may draw the
protein structure in CG model (including bonding and secondary structures) one
protein by one protein, but is there any method to draw the structure for all
the proteins at the same time?
Thanks again.
--Hualin
________________________________________
From: [email protected] [[email protected]] On Behalf
Of Mark Abraham [[email protected]]
Sent: Monday, January 23, 2012 3:22 PM
To: Discussion list for GROMACS users
Subject: Re: [gmx-users] PSF file in martini force field
On 24/01/2012 4:20 AM, Li, Hualin wrote:
> Hi all,
>
> I am running Gromacs on the system of several proteins on the membrane
> using martini force field.From the output files, if I want to generate the
> PSF files from them , is there any easy way to do it please?
No GROMACS utilities will write a PSF for CHARMM input. Consult the
CHARMM documentation.
Mark
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