Hello, I have got Gromacs version 4.0.7 and I' m trying to simulate and extend one patch of membrane (dppc128.pdb)downloaded by the website. I am following the gromacs tutorial "KALP-15 IN DPPC" but I have some problems during "step 2: modify the topology" because I need to find the following files:
aminoacids.rtp aminoacids.hdb aminoacids.c.tdb aminoacids.n.tdb aminoacids.r2b aminoacids.vsd ff_dum.itp ffnonbonded.itp ffbonded.itp forcefield.itp ions.itp spc.itp watermodels.dat that are reported in the tutorial. I can't find them in any directory. Could it depend on the different Gromacs versions? Any suggestion will be appreciated. thank you, Silvia -- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
