Hi Priyanka, Are you sure it's not merely due to PBC?
Cheers, Tsjerk On Feb 4, 2012 6:29 AM, "Priyanka Shah" <[email protected]> wrote: Dear gmx-users, Some residues are missing in my PDB file and during energy minimisation, two of the chains blown away from each other. How to resolve this problem. -- Let spontaneity guide you! -- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
-- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
