On 13/02/2012 8:54 PM, prashant kurkute wrote:
Dear all,
I am very new to GROMACS.
The my problem may be a very basic and stupid but very big for me!!!!!!..
I am performing Justin Lemkul Lipid tutorial
(http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin/gmx-tutorials/membrane_protein/index.html)
and I am upto the 3rd stage.
But after giving following command
grompp -f minim.mdp -c dppc128.gro -p topol_dppc.top -o em.tpr
I got the error like
Fatal error:
Atomtype CA not found
Please give me some valuable suggetion.
It seems likely you haven't followed the instructions well enough. It's
impossible for us to guess the manner in which that has occurred,
however. I suggest you start afresh, and proceed very carefully :-)
Mark
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