On 26/02/2012 8:36 PM, zhongjin wrote:
Hello to all users,
   I am not sure how to set pressure if pcoupltype  = semiisotropic
it should be :
; Pressure coupling
Pcoupl                   = Parrinello-Rahman
Pcoupltype               = semiisotropic
nstpcouple               = -1
; Time constant (ps), compressibility (1/bar) and reference P (bar)
tau-p                    = 1  1
compressibility          =0  4.5e-5
ref-p                    = 1.0   1.0
; Scaling of reference coordinates, No, All or COM
refcoord_scaling         = No
; Random seed for Andersen thermostat
andersen_seed            = 815131
or
; Pressure coupling
Pcoupl                   = Parrinello-Rahman
Pcoupltype               = semiisotropic
nstpcouple               = -1
; Time constant (ps), compressibility (1/bar) and reference P (bar)
tau-p                    = 1
compressibility          =0  4.5e-5
ref-p                    = 1.0   1.0  1.0
; Scaling of reference coordinates, No, All or COM
refcoord_scaling         = No
; Random seed for Andersen thermostat
andersen_seed            = 815131
How many values should be set for ref_p  and tau-p ?


See manual 7.3.15

Mark

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