Dear All,
Some of the complexes of PDB files in RCSB are not from protein-protein
interaction, but from the packing of protein crystal. Thus in solution the
"protien complex" may dissociate.
However as for the protein are usually very large, and I regard it is difficult
to observe that 2 (or more) subunit protein complex dissociate completely
during MD simulation.
Can you please introduce to me your experience that the "protein complex"
sifnificantly dissociate during MD?
I am looking forward to getting your reply.
Cheers,
Dialing
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