On 3/03/2012 5:14 PM, arun kumar wrote:
Dear all,

Iam trying to generate secondary structure plot through do_dssp program, but there was an error like "segmentation fault"

Reading file md.tpr, VERSION 4.0.7 (single precision)
Reading file md.tpr, VERSION 4.0.7 (single precision)
Segmentation fault (core dumped)
bash-4.1#

can anybody please say what it means and how to solve it

No, because there's no diagnostic information. Do other GROMACS tools work? Does the DSSP executable work?

Mark
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