Op 6 apr 2012 om 10:30 heeft "Xianwei Wang" <[email protected]> het volgende geschreven:
> Thank you for your answer! But if electric field was screened by the outside > water in the box ,how I decide the size of electric field in the protein when > I used "E_x = 1.0 0.71e-2 0" and solute wall distance of 1 nm? > Best wishes! > yours Xianwei Wang Approximately divided by 80. Don't know what you mean with solid wall. > > At 2012-04-06 14:53:58,"David van der Spoel" <[email protected]> wrote: > > Op 6 apr 2012 om 07:44 heeft "Xianwei Wang" <[email protected]> het > volgende geschreven: > >> Dear gmx users: >> I would like to apply electric field to my simulation box, and I have >> added these to my input file: >> ; Format is number of terms (int) and for all terms an amplitude (real) = >> ; and a phase angle (real) = >> E_x = 1.0 0.71e-2 0 >> What I want to know is whether the size of this electric field in my protein >> inside the box will be screened by the water around the protein? > > Yes. Water had high epsilon(0) >> Best wishes! >> >> >> >> -- >> gmx-users mailing list [email protected] >> http://lists.gromacs.org/mailman/listinfo/gmx-users >> Please search the archive at >> http://www.gromacs.org/Support/Mailing_Lists/Search before posting! >> Please don't post (un)subscribe requests to the list. Use the >> www interface or send it to [email protected]. >> Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > > > -- > gmx-users mailing list [email protected] > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [email protected]. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
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