priya thiyagarajan <[email protected]> wrote:

> hello sir,
>
> Thanks a lot for your help.. i got my own index file for my micelles using
> make_ndx..
>
> Thanking you,
>
> Hi Priya,
>
Try  g_spatial tools for micelle study,
http://www.gromacs.org/Documentation/Gromacs_Utilities/g_spatial


Check proparly that your index files are right ...
because your total result will depend your index file ..


With Best Wishes,
-- 
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