On Mon, Apr 23, 2012 at 6:45 PM, Justin A. Lemkul <[email protected]> wrote:
> > > On 4/23/12 1:38 PM, Steven Neumann wrote: > >> Dear Gromacs Users, >> >> My job failed on the cluster and I would like to run in from the >> checkpoint time >> created: >> >> mdrun -s umbrella0.tpr -cpi umbrella0.cpt -deffnm umbrella0 -pf >> pullf-umbrella0.xvg -px pullx-umbrella0.xvg >> >> Will existing files pullf-umbrella0.xvg and pullx-umbrella0.xvg be >> updated as >> the command for the initial run is: >> >> mdrun -s umbrella0.tpr -deffnm umbrella0 -pf pullf-umbrella0.xvg -px >> pullx-umbrella0.xvg >> >> > I see no reason why they wouldn't be. Is there some problem when > executing the appending run? > > -Justin > I am using 4.5.4. and -append is default. I am curious because I submit a script and only 3 out 6 files are copied back to my working directory, everything else is lost as only in temporary directly jobs can be run. No clue what is happening. Steven > > -- > ==============================**========== > > Justin A. Lemkul > Ph.D. Candidate > ICTAS Doctoral Scholar > MILES-IGERT Trainee > Department of Biochemistry > Virginia Tech > Blacksburg, VA > jalemkul[at]vt.edu | (540) 231-9080 > http://www.bevanlab.biochem.**vt.edu/Pages/Personal/justin<http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin> > > ==============================**========== > -- > gmx-users mailing list [email protected] > http://lists.gromacs.org/**mailman/listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users> > Please search the archive at http://www.gromacs.org/** > Support/Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>before > posting! > Please don't post (un)subscribe requests to the list. Use the www > interface or send it to [email protected]. > Can't post? Read > http://www.gromacs.org/**Support/Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists> >
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