http://uab.hyperfine.info/~pcl/files/popc36/
These were generated for the following work: (please reference): Lai, P.C. and Crasto, C.J. Beyond Modeling: All-Atom Olfactory Receptor Model Simulations Front. Gene. Volume 3 Year 2012 Number 61 DOI: 10.3389/fgene.2012.00061 On 2012-05-02 05:49:17PM +0530, Anirban Ghosh wrote: > Hi ALL, > > I was looking for a CHARMM36 format (atom-types) equilibrated POPC bilayer > (PDB/GRO) to use with the CHARMM36 FF in GROAMCS 4.5.5. I downloaded one > from Dr. Klauda's site ( > http://terpconnect.umd.edu/~jbklauda/research/download.html), but that > popc.pdb (under CHARMM36 FF) seem to have different atom-types (like P1 in > place of P, etc.) and hence pdb2gmx throws up error when processed with > CHARMM36 FF option. Is there any CHARMM36 FF format equilibrated POPC > bilayer available online, or can someone provide, please? > Thanks a lot in advance. > > > Regards, > > Anirban > -- > gmx-users mailing list [email protected] > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [email protected]. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists -- ================================================================== Peter C. Lai | University of Alabama-Birmingham Programmer/Analyst | KAUL 752A Genetics, Div. of Research | 705 South 20th Street [email protected] | Birmingham AL 35294-4461 (205) 690-0808 | ================================================================== -- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
