Respected Gromacs Developers, I am Rethinamalliga Gunasekaran, using different modules of GROMACS for my project and its guiding me profoundly.
Thank you for developing such a tool and also for your well guiding tutorial. I need to perform Protein Protein simulation and I tried with GROMACS with the tutorial for Protein-Ligand simulation. Can I use the tutorial for Protein-Ligand for Protein-Protein Simulation? I got the error in ions adding step insisting to check the coordinate file in topol.top and solv.gro. Kindly help me to do Protein Protein simulation via GROMACS. My thanks in advance. Sincerely, Rethina Malliga Gunasekaran, Department Of BioInformatics, Science Block, Alagappa University, Karaikudi – 630 004, India. http://alagappauniversity.academia.edu/RethinamalligaGunasekaran/ **
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