Hi, have a look at out recently developed all-atom force field.
It is compatible with AMBER force fields for proteins (ff99SB, ff99SB-ILDN and ff03). The compatibility was tested via microsecond simulations of a peptide embedded in a bilayer. The paper describing the peptide simulations along with an extension of the parameter set has been submitted, but for now have a look at this published paper: J. Phys. Chem. B, 2012, 116 (10), 3164-3179, doi: 10.1021/jp212503e All our parameters are available at on Lipidbook. Let me know if you need anything else! Best, J -- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
