On 5/22/12 1:26 PM, Seera Suryanarayana wrote:
Dear all gromas users,
                                  While i am running the grompp after first
mdrun command i got the following error.


File input/output error:
pr.mdp

Is there any explanation why is this happening?

It means that file doesn't exist in the working directory.

I would appreciate any help.I am new in using MD and gromacs in particular.


Do all the tutorials you can find until basic workflows become second nature. Here are a few:

http://www.gromacs.org/Documentation/Tutorials#General_GROMACS_Use

-Justin

--
========================================

Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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