On 5/22/12 2:00 PM, Seera Suryanarayana wrote:
Dear all gromas users,
    While i am running the grompp -c 1UZ9_em.gro -p 1UZ9.top -o 1UZ9_b4pr.tpr -f
pr.mdp after first mdrun command i got the following error.


File input/output error:
pr.mdp

Is there any explanation why is this happening?
I would appreciate any help.I am new in using MD and gromacs in particular.


I answered this already:

http://lists.gromacs.org/pipermail/gmx-users/2012-May/071679.html

If something is still unclear, reply to that post and explain what you don't understand, otherwise it just seems as if you're ignoring advice you're being given.

-Justin

--
========================================

Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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