Thanks Francesca. There is no bond between them. I merged topologies and the grompp error comes from the gmx bug posted by Mark. http://redmine.gromacs.org/issues/885 Thanks for this link Justin!
Steven On Fri, May 25, 2012 at 5:47 PM, Francesca <francesca.stanzi...@unina.it>wrote: > if you create a bond you need to have angle, tortion etc... > Maybe when you processed pb2gmx it create a bond between the 799 and 801. > Francesca > > -- > View this message in context: > http://gromacs.5086.n6.nabble.com/One-molculetype-for-3-proteins-tp4997727p4997773.html > Sent from the GROMACS Users Forum mailing list archive at Nabble.com. > -- > gmx-users mailing list gmx-users@gromacs.org > http://lists.gromacs.org/mailman/listinfo/gmx-users > Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > Please don't post (un)subscribe requests to the list. Use the > www interface or send it to gmx-users-requ...@gromacs.org. > Can't post? Read http://www.gromacs.org/Support/Mailing_Lists >
-- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
