my fault, when i ran gromacs to produce topology file for a nucleotide sequence it is showing the above error "There is a dangling bond at at least one of the terminal ends and the force field does not provide terminal entries or files. Edit a .n.tdb and/or .c.tdb file." i tried giving the starting and ending residues in .n.tdb and .c.tdb files but it did not work with an error saying "Fatal error: reading termini database: directive expected before line: P" am uploading my PDB file of my DNA-protein compex sequence in which the nucleotide sequence ranges from 15555 to 12216 http://gromacs.5086.n6.nabble.com/file/n4997914/dnaseq_rot1.pdb dnaseq_rot1.pdb
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