On 6/2/12 11:33 AM, Acoot Brett wrote:
Dear All,
Can you tell me a web link on a protocol or reference for steered production MD
or the production MD just for only a fragment of the whole protein, by GROMACS?
That's sort of a broad request. If you can describe more specifically what you
want to do, you're more likely to get some assistance. There are tons of
literature references about modeling peptide fragments. For other web links or
tutorials, a few minutes on the Gromacs website and Google will tell you if such
instructions exist.
-Justin
--
========================================
Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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