Information messages, such as those shown on the screen during mdrun are
output to stderr. So if you want to get them you should redirect as follows:
mdrun -v -s md.tpr 2> verbose.txt
In the case where you may need to get all output (from both stdout and
stderr) you should use:
mdrun -v -s md.tpr &> verbose.txt
Javier
El 18/06/12 08:49, Chandan Choudhury escribió:
Dear gmx users,
Is it possible to redirect the output of mdrun -v to a file while
submitting the job using pbs script?
mdrun -v -s md.tpr > verbose.txt
donot produce output (to file verbose.txt) while the job is running.
Chandan
--
Chandan kumar Choudhury
NCL, Pune
INDIA
--
Javier CEREZO BASTIDA
PhD Student
Physical Chemistry
Universidad de Murcia
Murcia (Spain)
Tel: (+34)868887434
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