Dear all! I've still could not find any possibilities of ussage of collision thermostat :( But as I've noticed I can use SD integrator which could mimic such conditions.
As I've understood the usage of that integrator exclude t_couple option from mdp file. If I'd like to use SD as the thermostat could you tell me possible parameters for the tau_t as well as proper selection of the t_groups for the membrane-protein system. Thanks again, James -- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users * Only plain text messages are allowed! * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
