Hi Justin, That works really fine and thanks.
Now, how can I add additional SOL molecules only one side of the bilayer (either upper or lower)? Since my protein binds at the outer side (extracellular region) of the membrane I can only fill the upper (extracellular) region with SOL molecules instead of adding them also inside the membrane, to reduce the system size ? Can we do magic here with any commands to add SOL molecules only single side of the membrane? Thanks Peterson J -- View this message in context: http://gromacs.5086.n6.nabble.com/Error-in-Membrane-simulations-with-POPC-bilayer-tp4999161p4999625.html Sent from the GROMACS Users Forum mailing list archive at Nabble.com. -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Only plain text messages are allowed! * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
