On 10/7/12 3:52 PM, Ali Alizadeh wrote:
Dear All users
How to can i replace a molecule(for example methane) with another
molecule(propane)?
Number of these molecules are given and their position is random,
Can I use genbox or genion, How to do i do it?
Likely you can't, as you were already advised:
http://lists.gromacs.org/pipermail/gmx-users/2012-October/075338.html
A more robust approach for dealing with mixed systems can be found here:
http://www.gromacs.org/Documentation/How-tos/Mixed_Solvents
-Justin
--
========================================
Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
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