Thanks, Erik. Actually, I tried to use periodic molecules in my previous simulations. But I think that can be only applied to DNA molecules of certain length, say 10bps, 20bps. But my DNA molecule here doesn't meet that criteria.
Dudu -- View this message in context: http://gromacs.5086.n6.nabble.com/DNA-orientation-restrain-tp5001460p5001774.html Sent from the GROMACS Users Forum mailing list archive at Nabble.com. -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists