On 12/20/12 11:38 AM, Kieu Thu Nguyen wrote:
Dear All,

I convert cg to fg representation by command lines

  g_fg2cg -pcg cg.top -pfg fg.top -c cg.gro -n 1 -o fg.grog_fg2cg -pcg
cg.top -pfg fg.top -c cg.xtc -n 1 -o cg2fg.xtc

But there is a notice "command not found" in the terminal.
I see this command used in Gromacs v3.3.1
Does it not run in Gromacs v4.5 ?


g_fg2cg is not an official Gromacs program; it is part of a modified 3.3.1 distribution provided by the MARTINI developers. Their tutorial describes installing and using the modified version.

-Justin

--
========================================

Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin

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