Thank you, but I don't see how performing cluster analysis with g_angle Francesco
2013/1/21 Justin Lemkul <[email protected]> > > > On 1/21/13 1:54 PM, francesco oteri wrote: > >> Dear gromacs users, >> I am trying to run dihedral space clustering with g_dih, >> but I found that it gives me a lot of error like: >> Dihedral around 24,26 not found in topology. Using mult=3 >> >> Looking on the net, I found something alarming: g_dih is gromos specific! >> http://lists.gromacs.org/**pipermail/gmx-users/2006-**August/023230.html<http://lists.gromacs.org/pipermail/gmx-users/2006-August/023230.html> >> >> It is still true? >> >> > Yes, and it is for this reason that g_dih has been removed from Gromacs. > You can likely accomplish whatever you're trying to do with g_angle. > > -Justin > > -- > ==============================**========== > > Justin A. Lemkul, Ph.D. > Research Scientist > Department of Biochemistry > Virginia Tech > Blacksburg, VA > jalemkul[at]vt.edu | (540) 231-9080 > http://www.bevanlab.biochem.**vt.edu/Pages/Personal/justin<http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin> > > ==============================**========== > -- > gmx-users mailing list [email protected] > http://lists.gromacs.org/**mailman/listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users> > * Please search the archive at http://www.gromacs.org/** > Support/Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>before > posting! > * Please don't post (un)subscribe requests to the list. Use the www > interface or send it to [email protected]. > * Can't post? Read > http://www.gromacs.org/**Support/Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists> > -- Cordiali saluti, Dr.Oteri Francesco -- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
