On 1/24/13 11:03 AM, Kavyashree M wrote:
Dear users,
I have a little confusion -
The hbmap.xpm file gives the existence of each hydrogen bond.
The file mentions -
" c #FFFFFF " /* "None" */,
"o c #FF0000 " /* "Present" */,
Meaning -
character "<space>" in white colour means Hbond not present
character "o" in red colour means Hbond is present.
In addition, the file also contains white coloured "o" what is
this?
There are only two characters in the .xpm file, a space and an 'o' as you noted
above. The font color that appears in your terminal is whatever you have set it
to be; there is no significance of different colored letters in the .xpm file.
There either is a hydrogen bond in a frame (in which case you see 'o') or there
is not (and thus a blank space).
-Justin
--
========================================
Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin
========================================
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