It shouldn't generate output. It will make your system find your
gromacs installation, however. Try e.g. "which mdrun".
Erik
On Feb 13, 2013, at 5:06 AM, David Sáez wrote:
Thanks for your answer Justin. I followed your advice:
When I type
*$ source /usr/local/gromacs/bin/GMXRC*
*$*
Nothing happened, the prompt returns normally and no action is
executed. Do
you have any idea?
On Tue, Feb 12, 2013 at 11:27 PM, Justin Lemkul <[email protected]>
wrote:
On 2/12/13 9:24 PM, David Sáez wrote:
Hello everybody, I'm trying to install Gromacs 4.6 in my Ubuntu
12.04
laptop. As I am not a a skilled user, I tried the Quick and Dirty
Installation, After following the instructions I obtained this
message
when
trying to execute GMXRC:
david@HAL-9000:~$ /usr/local/gromacs/bin/GMXRC
/usr/local/gromacs/bin/GMXRC: line 34: return: can only `return'
from a
function or sourced script
/usr/local/gromacs/bin/GMXRC: line 43: CSH:: command not found
/usr/local/gromacs/bin/GMXRC.**csh: line 8: syntax error near
unexpected
token `setenv'
/usr/local/gromacs/bin/GMXRC.**csh: line 8: `if (! $?
LD_LIBRARY_PATH)
setenv
LD_LIBRARY_PATH ""'
Could someone give some help?
Note the first error - you need to source the file.
$ source /usr/local/gromacs/bin/GMXRC
-Justin
--
==============================**==========
Justin A. Lemkul, Ph.D.
Research Scientist
Department of Biochemistry
Virginia Tech
Blacksburg, VA
jalemkul[at]vt.edu | (540) 231-9080
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>
==============================**==========
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David A. Sáez San Martín
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