You can not use different index files.
You must use different groups in the same index. Merge the 2 ndx into one
single file.

Cheers
Nuno Azoia

On Fri, Feb 15, 2013 at 1:58 PM, 라지브간디 <[email protected]> wrote:

> How do i use two different ndx file ( which has few residues) as a input
> to calculate between their distance using g_dist, g_mindist and so on?
>
>
>
>
> Regards
>
>
> Raju
>
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