Dear Justin, Thank you a lot for help and kind passion to listen me.
I finally come with the my desired out put. I I am grateful to you for help. With Best Wishes, Rama david On Thu, Apr 4, 2013 at 7:09 PM, Justin Lemkul <[email protected]> wrote: > > > On 4/4/13 9:37 AM, rama david wrote: > >> Thank you a lot justin for offering me help. >> >> I am interested to use g_sham ..( And if the other command give me my >> output, I am also interested to know the other way ) >> >> I was confuse with the input that I have to give with g_sham. >> >> I proceed the following command >> >> >> g_energy is used to get potential ( pot.xvg ) >> g_rmsdist is used to get rmsdist.xvg >> What sis next ???????? >> >> My confusion start with the input to give the g_sas ... >> >> As you mention >> The input file is simple. It can be one of two forms: >> >> time x y >> >> or simply: >> >> x y >> >> >> But what is flag for command input and out put. >> >> > You need to create your own input, parsing the values from pot.xvg and > rmsdist.xvg. The combined file (.xvg) is then passed to g_sham -f. > > > -Justin > > -- > ==============================**========== > > Justin A. Lemkul, Ph.D. > Research Scientist > Department of Biochemistry > Virginia Tech > Blacksburg, VA > jalemkul[at]vt.edu | (540) 231-9080 > http://www.bevanlab.biochem.**vt.edu/Pages/Personal/justin<http://www.bevanlab.biochem.vt.edu/Pages/Personal/justin> > > ==============================**========== > -- > gmx-users mailing list [email protected] > http://lists.gromacs.org/**mailman/listinfo/gmx-users<http://lists.gromacs.org/mailman/listinfo/gmx-users> > * Please search the archive at http://www.gromacs.org/** > Support/Mailing_Lists/Search<http://www.gromacs.org/Support/Mailing_Lists/Search>before > posting! > * Please don't post (un)subscribe requests to the list. Use the www > interface or send it to [email protected]. > * Can't post? Read > http://www.gromacs.org/**Support/Mailing_Lists<http://www.gromacs.org/Support/Mailing_Lists> > -- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
