Dear users I have a question regarding the cube file output we get from g_spatial analysis. My system comprises of hundreds of ionic liquids (composed of cation and anion). If I would like to see the spatial distribution of anions around cation, how do I get an average distribution. E.g, the way I am using it now, spatial distribution of all the anions in simulation box is shown, which is very inconclusive. I cannot specify a particular set of cations and anions, as they separate over time.
Please help -- With Best Wishes Venkat Reddy Chirasani PhD student Laboratory of Computational Biophysics Department of Biotechnology IIT Madras Chennai INDIA-600036 -- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
