Probably, VMD tries to load the whole trajectory into memory, and that runs out. You should be using trjconv to get a particular frame. Also see http://www.gromacs.org/Documentation/How-tos/Reducing_Trajectory_Storage_Volume to avoid generating redundant information to throw away later.
Mark On Mon, Jun 3, 2013 at 5:03 PM, maggin <[email protected]> wrote: > Hi, I use VMD to see GROMACS trajectory, I run 20ns md, there are > 10,000,000 > step, when load to VMD, it total 2777 frames. > > I don't known if there something wrong in it ? > > How to get the frame about 19532ps? > > Thank you very much! > > maggin > > > > -- > View this message in context: > http://gromacs.5086.x6.nabble.com/frame-in-VMD-tp5008737.html > Sent from the GROMACS Users Forum mailing list archive at Nabble.com. > -- > gmx-users mailing list [email protected] > http://lists.gromacs.org/mailman/listinfo/gmx-users > * Please search the archive at > http://www.gromacs.org/Support/Mailing_Lists/Search before posting! > * Please don't post (un)subscribe requests to the list. Use the > www interface or send it to [email protected]. > * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists > -- gmx-users mailing list [email protected] http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to [email protected]. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
