Dear Users,
I am running MD simulations of a protein-ligand system. Sometimes when i do
an mdrun, be it for the energy minimization or during the nvt and npt
equillibration  or the actual md run step, sometimes the output files are
named in a very odd way (strange extensions) e.g em.gro.tprr or md.tpr.cpt,

Can anyone explain the cause of this?

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