Nah, this happens mostly on the two largest entity kinds (by total space 
used), and large amounts of data appear to actually be missing from the 
backup.  I have filed an issue 
at 
https://code.google.com/p/googleappengine/issues/detail?id=9702&thanks=9702&ts=1374628562

On Tuesday, July 23, 2013 10:12:38 PM UTC-7, Ryan Huebsch wrote:
>
> One possible cause is some shards did not have any data to process and 
> produced 0B files. Does the total size across all the files add up to 
> approximate size for that kind (datastore statistics in the admin console 
> can provide you this value). If it is not adding up, please provide your 
> appId and the kind/id for the job here or create an issue on the tracker 
> with that info so we can look into what may have gone wrong.
>
>
> On Mon, Jul 22, 2013 at 3:44 PM, <[email protected] <javascript:>>wrote:
>
>> Hi guys, I'm using the scheduled backup from 
>> https://developers.google.com/appengine/articles/scheduled_backups on a 
>> decently sized datastore.  I have it set to run a backup to google cloud 
>> storage once per week, but looking at the most recent backup from 
>> yesterday, some 37% of the backup files are missing.  Some files of the 
>> form 
>> "datastore_backup_AutomaticBackup2013_07_21_<EntityName>-<id>-output-0-retry-0"
>>  
>> in GCS have size 0B in the google cloud console.  The overall status of the 
>> finished job is 'Completed' in Datastore Admin, though there are a few 
>> errors in the logs, such as "UnknownError: ApplicationError: 7"
>>
>> Any ideas on what might cause this?
>>
>> Thanks,
>> Chris
>>
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