Same problem here! I also migrated my Standard Java app to Flex Env and was 
surprised by the great performance there. Unfortunately, with the deprecation 
of the compat runtime, there's no easy way to leave it there any more. We'd 
have to rewrite lots of our code and some vital services like memcache are not 
even available at the moment. So we had to go back to Standard and there we 
experience very bad performance, same as in the logs you just showed. More than 
10s response latency for really no special reason is not ok for user frontends. 

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