Use the vAxes option to define each axis, then use the series option to 
assign different lines to each axis.  You can replace the vAxis option in 
the visualization playground's Line Chart example with this:

vAxes: {
   0: {logScale: true},
   1: {logScale: true}
},
series: {
   0: {targetAxisIndex: 0},
   1: {targetAxisIndex: 0},
   2: {targetAxisIndex: 1},
}

http://code.google.com/apis/ajax/playground/?type=visualization#line_chart


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