Jim and everybody, Related to #267<https://informatics.gpcnetwork.org/trac/Project/ticket/267>, discussion has resumed in the OHDSI community.
I've been invited to help complete a proposal there, but I don't think it should pre-empt other stuff I'm working on. -- Dan ________________________________ From: Rimma Belenkaya [[email protected]] Sent: Saturday, January 23, 2016 10:00 PM To: Dan Connolly Subject: [OHDSI Forums] [Implementers] "Smoker" in the SNOMED vocabulary : Condition Occurence [http://forums.ohdsi.org/user_avatar/forums.ohdsi.org/rimma/45/241.png] rimma<http://forums.ohdsi.org/users/rimma> January 24 Attached is a draft proposal for representation of tobacco smoking behavior and tobacco type in OMOP CDM v5 to support the PCORnet CDM requirements. Since these requirements are partially derived from the Meaningful Use Core Measures (also attached) and tobacco smoking representation in EMR, they should be a good starting point for comprehensive tobacco conventions for OMOP CDM. What's lacking in this proposal is analysis of how the proposed concepts and conventions will support analytical queries. I encourage all the previously contributing or interested members, @Christian_Reich<http://forums.ohdsi.org/users/christian_reich>, @DTorok<http://forums.ohdsi.org/users/dtorok>, @toanong<http://forums.ohdsi.org/users/toanong>, @mkhayter<http://forums.ohdsi.org/users/mkhayter>, @schillil<http://forums.ohdsi.org/users/schillil>, @dckc<http://forums.ohdsi.org/users/dckc> , @ushah<http://forums.ohdsi.org/users/ushah>, @Vojtech_Huser<http://forums.ohdsi.org/users/vojtech_huser>, to get together and expediently turn these into a comprehensive proposal. Please let me know if interested. Thank you. Proposal http://www.ohdsi.org/web/wiki/lib/exe/fetch.php?media=documentation:next_cdm:tobacco_handling_proposal_2016-01-23.pdf Meaningful Use Core Measures https://www.cms.gov/Regulations-and-Guidance/Legislation/EHRIncentivePrograms/downloads/9_Record_Smoking_Status.pdf To respond, reply to this email or visit http://forums.ohdsi.org/t/smoker-in-the-snomed-vocabulary-condition-occurence/1078/6 in your browser. ________________________________ Previous Replies [http://forums.ohdsi.org/user_avatar/forums.ohdsi.org/christian_reich/45/45.png] Christian_Reich<http://forums.ohdsi.org/users/christian_reich> January 20 @DTorok<http://forums.ohdsi.org/users/dtorok>: That was my initial reflex as well. However, "mean time" is not that quick with regard to making vocab releases, as you painfully know, and also we need to solve this properly. It is important. [http://forums.ohdsi.org/user_avatar/forums.ohdsi.org/dtorok/45/41.png] DTorok<http://forums.ohdsi.org/users/dtorok> January 20 In the mean time, wouldn't make sense to change the domain id to 'Observation' for the SNOMED concepts 'Never smoked tobacco' (id = 4144272) and 'Ex-smoker' (id = 4310250)? [http://forums.ohdsi.org/user_avatar/forums.ohdsi.org/rimma/45/241.png] rimma<http://forums.ohdsi.org/users/rimma> January 20 @Christian_Reich<http://forums.ohdsi.org/users/christian_reich> Yes, we can take conventions and vocabulary that we created for CDRN as a foundation. However, it will need a thorough review and input from practitioners and analysts. I will review it and post over the weekend. [http://forums.ohdsi.org/user_avatar/forums.ohdsi.org/christian_reich/45/45.png] Christian_Reich<http://forums.ohdsi.org/users/christian_reich> January 20 @rimma<http://forums.ohdsi.org/users/rimma>: Is this the chance for us to create a convention for smoking and other lifestyle choices? I believe you essentially have the solution. It keeps popping up, now it happened at IMS, and I don't have a good answer for Urvi. Let us know. [http://forums.ohdsi.org/letter_avatar/ushah/45/2.png] ushah<http://forums.ohdsi.org/users/ushah> January 19 We are coming across a few records related to "smoking, ex-smoker" which are mapped to Condition Occurrence due to the snomed vocabulary. Could this be something that gets changed in the next version of the vocabulary? The mapping type should not be condition, correct? ________________________________ To respond, reply to this email or visit http://forums.ohdsi.org/t/smoker-in-the-snomed-vocabulary-condition-occurence/1078/6 in your browser. To unsubscribe from these emails, visit your user preferences<http://forums.ohdsi.org/my/preferences>.
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