What else for tomorrow?
* 29 Nov gpc-dev shared
notes<https://docs.google.com/document/d/1XPzFMF3XwWqh6YIlUggSgU5swM-iv4IhI01AhxofYKI/edit>;
scribe: UNMC
agenda proposal:
________________________________
1. Convene, take roll, review records and plan next meeting
* Meeting ID and access code:
817-393-381<https://global.gotomeeting.com/meeting/join/817393381>; call +1
(571) 317-3131
* roll: all 12
DevTeams<https://informatics.gpcnetwork.org/trac/Project/wiki/DevTeams>
represented? KUMC, CMH, UIOWA, WISC, MCW, MCRF, UMN, UNMC, UTHSCSA, UTSW, MU, IU
Reminder - put institution after your name in GoToMeeting preferences
* today's scribe: UNMC
* comments on the agenda? On last week’s notes? No.
(#12<https://informatics.gpcnetwork.org/trac/Project/ticket/12>)
Recent tickets
opened/closed<https://informatics.gpcnetwork.org/trac/Project/timeline> - FYI
(i.e. not intended for discussion)
* Discussion of
milestone:cohort-char-bc-db<https://informatics.gpcnetwork.org/trac/Project/milestone/cohort-char-bc-db>
awaits data from UIOWA.
* Next Meeting: 29 Nov; scribe: IU?
Note LRU
schedule<https://informatics.gpcnetwork.org/trac/Project/ticket/12#comment:92>,
which nominates IU, UMN …
*
HackathonFour<https://informatics.gpcnetwork.org/trac/Project/wiki/HackathonFour>
17-18 Jan 2017 at KUMC in Kansas City, KS
registration survey<https://redcap.kumc.edu/surveys/?s=D7Y3EHDYWP> is open
2. Inquiring regarding AMIA Joint Summit Implementation Track panel on
ETL March 2017<http://listserv.kumc.edu/pipermail/gpc-dev/2016q4/003353.html>
Russ Waitman ->
AMIAJointSummit2016ETLPanelSurvey<https://redcap.kumc.edu/surveys/?s=LCA9FWKTDJ>
3. Milestone:adaptable-monitor
<https://informatics.gpcnetwork.org/trac/Project/milestone/adaptable-monitor>#478<https://informatics.gpcnetwork.org/trac/Project/ticket/478>
ADAPTABLE PTR query due 2 Dec
4.
Milestone:adaptable-accrual<https://informatics.gpcnetwork.org/trac/Project/milestone/adaptable-accrual>
due Dec 19
* #354<https://informatics.gpcnetwork.org/trac/Project/ticket/354>
recruit ADAPTABLE patients at all participating GPC
sites<https://informatics.gpcnetwork.org/trac/Project/ticket/354>
* launch date estimates from the other sites in the second wave?
UTHSCSA: Laura to get an estimate from Alex B. and company
* setting up my chart
* Nick to share my chart set-up experience.
* Dan to ask Sravani how KUMC did it.
5.
Milestone:grouse-research-1<https://informatics.gpcnetwork.org/trac/Project/milestone/grouse-research-1>
* #540<https://informatics.gpcnetwork.org/trac/Project/ticket/540>
Finder file for GROUSE
(UTHSCSA)<https://informatics.gpcnetwork.org/trac/Project/ticket/540> created;
ref
* #526<https://informatics.gpcnetwork.org/trac/Project/ticket/526>
Finder file for GROUSE
(KUMC)<https://informatics.gpcnetwork.org/trac/Project/ticket/526> ->
grouse/patient_finder.sql<https://github.com/kumc-bmi/heron/blob/grouse_finder_g526/grouse/patient_finder.sql>
9f9e261
* #401<https://informatics.gpcnetwork.org/trac/Project/ticket/401>
distribute key/salt to GPC sites for Cohort Characterization study with CMS
data<https://informatics.gpcnetwork.org/trac/Project/ticket/401>
* GPC GROUSE Key
Distribution<https://redcap.gpcnetwork.org/redcap_v6.11.5/index.php?pid=65>
redcap project 65
* Then use
obfuscate.py<https://github.com/kumc-bmi/heron/blob/grouse_finder_g526/grouse/obfuscate.py>
to generate hashes.
6. #431 text
notes<https://informatics.gpcnetwork.org/trac/Project/ticket/431>: GK: “.. I'll
start some discussion within the GPC-DEV list to see in which use cases people
anticipate using ...”
7.
Milestone:cdm-refresh6<https://informatics.gpcnetwork.org/trac/Project/milestone/cdm-refresh6>
( Cycle 2 ) incoming popmednet query arrived 7 Nov; reply due 16 Dec
* Risks, update by site
* KUMC: beta SAS code worked OK, but...
* having trouble with the revision of SAS code that came via pop
med net: workstation goes to sleep.
* #522<https://informatics.gpcnetwork.org/trac/Project/ticket/522>
"DAYS_SUPPLY" column in CDM v3 prescribing table not populated with
i2p-transform at
KUMC<https://informatics.gpcnetwork.org/trac/Project/ticket/522>
* CMH: skipped last time around?
*
#359<https://informatics.gpcnetwork.org/trac/Project/ticket/359>:
GPCdateranges<https://informatics.gpcnetwork.org/trac/Project/wiki/GPCdateranges>?
* UIOWA: on track; working through minor errors
* WISC
* need to assess growing the SAS server if the entire database is
sucked in for analysis.
* MCW: Minor errors, finalizing and expect to be ready early the week
of 28 Nov
* MCRF: skipped?
* #155<https://informatics.gpcnetwork.org/trac/Project/ticket/155>
correlating observations with
encounters<https://informatics.gpcnetwork.org/trac/Project/ticket/155>:
“Reporting [each site’s] approach in the annotated data dictionary” is as good
as it gets?
* #492<https://informatics.gpcnetwork.org/trac/Project/ticket/492>
How to Build SAS CDM v3 Medication
Tables<https://informatics.gpcnetwork.org/trac/Project/ticket/492>
* UMN
* Dispensing TODO. ETA Nov 30
* UNMC:
#518<https://informatics.gpcnetwork.org/trac/Project/ticket/518> skipped?
* UTHSCSA: skipped?
* UTSW
* Mapping Medication
Mixtures<http://listserv.kumc.edu/pipermail/gpc-dev/2016q4/003349.html>
Phillip Reeder
* Jim to contact Phillip offline and share with everyone.
* Dan to ask Russ if he has related experience to share.
* MU #517<https://informatics.gpcnetwork.org/trac/Project/ticket/517>
* Have one issue with LAB table.
* And one investigative issue left.
* IU: Planning to run the SAS code on Monday 28 Nov
what news?
________________________________
--
Dan
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