Awesome! Thank you Phillip. On Tue, Jan 24, 2017 at 1:14 PM, Phillip Reeder < phillip.ree...@utsouthwestern.edu> wrote:
> Our hierarchies, including our deployment of LOINC, are updated and on > babel now. > > Phillip > > From: <furmanc...@icnanotox.org> on behalf of Al'ona Furmanchuk < > alona.furmanc...@northwestern.edu> > Date: Monday, January 23, 2017 at 3:28 PM > To: Phillip Reeder <phillip.ree...@utsouthwestern.edu> > Cc: Dan Connolly <dconno...@kumc.edu>, Nathan Graham <ngra...@kumc.edu>, " > lindsey.c...@northwestern.edu" <lindsey.c...@northwestern.edu>, " > gpc-dev@listserv.kumc.edu" <gpc-dev@listserv.kumc.edu> > Subject: Re: Where are UTSW Glucose labs? (#551) > > I appreciate your efforts > > On Mon, Jan 23, 2017 at 1:44 PM, Phillip Reeder <Phillip.Reeder@ > utsouthwestern.edu> wrote: > >> I’m actively working to re-load the UTSW hierarchies onto babel. We’re >> using the GPC loinc hierarchy with our local terms under the mapped loinc >> term. Hope to have everything imported today. >> >> Phillip >> >> From: Dan Connolly <dconno...@kumc.edu> >> Date: Friday, January 20, 2017 at 2:21 PM >> To: Al'ona Furmanchuk <alona.furmanc...@northwestern.edu>, Nathan Graham >> <ngra...@kumc.edu> >> Cc: Phillip Reeder <phillip.ree...@utsouthwestern.edu>, Lindsey Lynne >> Cook <lindsey.c...@northwestern.edu>, "<gpc-dev@listserv.kumc.edu>" < >> gpc-dev@listserv.kumc.edu> >> Subject: Where are UTSW Glucose labs? (#551) >> >> Phillip, while you're in the Next-D neighborhood... >> >> Where are your glucose labs? i.e. what LOINC codes and/or i2b2 paths do >> you use? >> >> We looked on babel and couldn't find any UTSW labs. >> >> -- >> Dan >> >> ------------------------------ >> *From:*furmanc...@icnanotox.org [furmanc...@icnanotox.org] on behalf of >> Al'ona Furmanchuk [alona.furmanc...@northwestern.edu] >> *Sent:* Wednesday, January 18, 2017 7:40 AM >> *To:* Nathan Graham >> *Cc:* phillip.ree...@utsouthwestern.edu; Dan Connolly; Lindsey Lynne Cook >> *Subject:* Re: Phillip's e-mail copied for Al'ona >> >> Hello, Phillip. >> Dan Connolly suggested you might be the right person to ask about >> location of lab information in utsw_terms schema or elsewhere else in i2b2 >> database on babel. >> Recently I was doing initial assessment of data from different GPC sides >> participating in the Next-D project. I was trying to extract information >> on labs from i2b2metadata schemas by using sql. >> Here is an example of commands I tried: >> select c_name, c_totalnum, c_basecode from utsw_terms where c_basecode >> like 'LOINC:%' and UPPER(c_name) like '%GLUCOSE%' order by c_basecode >> or >> select c_name, c_totalnum, c_basecode from utsw_terms where UPPER(c_name) >> like '%LOINC:%' and UPPER(c_name) like '%GLUCOSE%' order by c_basecode >> Dan’s search with the i2b2 web UI also ended up with no information on >> labs for this side. >> I wonder if you could help us or suggested right person to ask about how >> to find labs’ information (names and LOINC codes) for UTSW side. >> >> With respect, >> Alona. >> >> On Tue, Jan 17, 2017 at 4:28 PM, Nathan Graham <ngra...@kumc.edu> wrote: >> >>> Al’ona, >>> >>> >>> >>> Phillip is copied (phillip.ree...@utsouthwestern.edu). >>> >>> >>> >>> -- >>> >>> Nathan >>> >> >> >> >> -- >> Al’ona Furmanchuk, Ph.D. >> Research Associate >> >> Department of Electrical Engineering and Computer Science >> Northwestern University >> 2145 Sheridan Road, Tech L359 >> Evanston, IL 60208 >> Web: http://furmanchuk.com/ >> <https://urldefense.proofpoint.com/v2/url?u=http-3A__furmanchuk.com_&d=CwMFAw&c=yHlS04HhBraes5BQ9ueu5zKhE7rtNXt_d012z2PA6ws&r=-aRkmw3Ob1oZRrrYmR1wHysw9FWMRlmk_CMIVWKi32KhS_EbXW7cMBGcBAmqh95W&m=DXEAQVuOfuwsEaLXAr8SVnMub78oQOtJ5rHUmVgdo5I&s=AGRUZSFuQrUF6kCnAhGB6W_UQ6u2Rl4t1R4yR5NM53I&e=> >> E-mail: alona.furmanc...@northwestern.edu <furmanc...@icnanotox.org> >> Phone: 847-467-2299 <(847)%20467-2299> >> >> ------------------------------ >> >> UT Southwestern >> >> Medical Center >> >> The future of medicine, today. >> > > > > -- > Al’ona Furmanchuk, Ph.D. > Research Associate > > Department of Electrical Engineering and Computer Science > Northwestern University > 2145 Sheridan Road, Tech L359 > Evanston, IL 60208 > Web: http://furmanchuk.com/ > <https://urldefense.proofpoint.com/v2/url?u=http-3A__furmanchuk.com_&d=CwMFAw&c=yHlS04HhBraes5BQ9ueu5zKhE7rtNXt_d012z2PA6ws&r=-aRkmw3Ob1oZRrrYmR1wHysw9FWMRlmk_CMIVWKi32KhS_EbXW7cMBGcBAmqh95W&m=AU3uoVGPeSJvY8GKtAcPEKALoBlsTaWrWKP6PQFl0M0&s=0117v2GMt2usXO9XAU2cmmRCrcXXHu3yCg_or3Opr0Y&e=> > E-mail: alona.furmanc...@northwestern.edu <furmanc...@icnanotox.org> > Phone: 847-467-2299 <(847)%20467-2299> > -- Al’ona Furmanchuk, Ph.D. Research Associate Department of Electrical Engineering and Computer Science Northwestern University 2145 Sheridan Road, Tech L359 Evanston, IL 60208 Web: http://furmanchuk.com/ E-mail: alona.furmanc...@northwestern.edu <furmanc...@icnanotox.org> Phone: 847-467-2299
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