What else for tomorrow?
Intermountain is scheduled to scribe.
https://docs.google.com/document/d/1D7AgAmKNSg249kunB7eVADsfH69YEqkajt3Cmsniorw/edit
agenda snapshot:
1. Convene, take roll, review records and plan the next meeting(s).
* 11:00 a.m. Central Time.
Meeting ID and access code:
817-393-381<https://global.gotomeeting.com/meeting/join/817393381>; call +1
(571) 317-3131
* Roll; Reminder - put site after your name in
GoToMeeting<https://global.gotomeeting.com/meeting/join/817393381> preferences
GPC DevTeams<https://informatics.gpcnetwork.org/trac/Project/wiki/DevTeams>
represented? KUMC (chair), UIOWA, MCW, MCRI, UNMC, UTHSCSA, UTSW, MU, IndianaU,
Utah, Allina, Intermountain (scribe), UTH
* Comments on the agenda? (ref
SoftwareDev#tracking<https://informatics.gpcnetwork.org/trac/Project/wiki/SoftwareDev#tracking>)
On last week’s
notes?<https://docs.google.com/document/d/1D7AgAmKNSg249kunB7eVADsfH69YEqkajt3Cmsniorw/edit#heading=h.9ioc8gnd1ijp>
(#12<https://informatics.gpcnetwork.org/trac/Project/ticket/12>)
Recent tickets
opened/closed<https://informatics.gpcnetwork.org/trac/Project/timeline> - FYI
(i.e. not intended for discussion)
* #762 (Peer review of Houston’s PCORNet CDM)
created<https://informatics.gpcnetwork.org/trac/Project/ticket/762>
* Next meeting(s): Sep 1; scribe: UIOWA? MCRI?
* Note scribe
rotation<https://docs.google.com/document/d/1fPoDn0pdVvC-Mct58X7wkGD2rNiId8aNZ9JG_WCbcf4/edit#heading=h.zbjzupqx0rh7>
appendix
* FW: Sentinel next steps in PCORnet
<http://listserv.kumc.edu/pipermail/gpc-dev/2020q3/011005.html> Russ Waitman
Jul 1
Dan/KUMC to get more info about volume / quality issues where the line was
divided (not immediately)
*
DeathDataSharing<https://informatics.gpcnetwork.org/trac/Project/wiki/DeathDataSharing>
- license / justification
DC: UIOWA asked Dec
2019<https://informatics.gpcnetwork.org/trac/Project/ticket/688#comment:18> -
answer was private communication from RW.
DC to follow up with Deandra - in progress
2. 2020 Data Curation Queries from DRNOC Forum July
2020<https://pcornet.imeetcentral.com/drnoc-workgroups/folder/WzIwLDEyOTgxNzU1XQ/WzIsNzEzMTYxNjld/>
* Lab characterization v1 - debrief
10 Aug query distribution; 24 Aug results due
* Cycle 8, Third Refresh DC v5.13?
5 Oct distribution; 26 Oct results due
3.
Milestone:covid19wk<https://informatics.gpcnetwork.org/trac/Project/milestone/covid19wk>
* #759<https://informatics.gpcnetwork.org/trac/Project/ticket/759>
covid19 PCORNet datamarts
<https://informatics.gpcnetwork.org/trac/Project/ticket/759>funding is via CDC
directly to individual sites; Aug 5 to PMs; 6 GPC sites; not KUMC, MU, UTSW
unless additional funding. - News?
4.
Milestone:tumor-reg-18<https://informatics.gpcnetwork.org/trac/Project/milestone/tumor-reg-18>
aiming for Jul 10
* #749<https://informatics.gpcnetwork.org/trac/Project/ticket/749>
PCORNet style TUMOR
table<https://informatics.gpcnetwork.org/trac/Project/ticket/749> -
kumc-bmi/naaccr-tumor-data
<https://github.com/kumc-bmi/naaccr-tumor-data>#760<https://informatics.gpcnetwork.org/trac/Project/ticket/760>
duplicates in tumor table: collect data from
sites<https://informatics.gpcnetwork.org/trac/Project/ticket/760> - DROC
Request
#82<https://redcap.kumc.edu/redcap_v9.5.25/DataEntry/index.php?pid=16659&id=82&event_id=44812&page=gpc_droc_oversight_request>
- SAS code for DROC
#82<http://listserv.kumc.edu/pipermail/gpc-dev/2020q3/011046.html>
* Brad to follow up with Brian / Maren re Where to submit
* Brad/Brian: Is September 1 to have a TUMOR table, run SAS code and
return results realistic?
* UIOWA - done
* UTHSCSA - All set to submit
* KUMC - 1 Sep looks feasible
* MCRF - 1 Sep seems feasible, yes.
* MCW - 1 Sep is possible but risky
* Indiana - Jeff will spend ~1hr trying
kumc-bmi/naaccr-tumor-data<https://github.com/kumc-bmi/naaccr-tumor-data>
* UTSW - still testing code. July 14th is the latest JAR file.
* DC to look into patient_mapping using item 2300 MRN
* MU - 1 Sep at risk, at best
* (UNMC - maybe in the future.)
* (Utah - Not currently able to participate. Access to tumor
registry still in progress.)
* Allina - Need more time than 1 Sep
* (Intermountain - still working thru organizational issues to get
access to the tumor registry data.)
* #739<https://informatics.gpcnetwork.org/trac/Project/ticket/739> HERON
NAACCR ETL outdated by
v18<https://informatics.gpcnetwork.org/trac/Project/ticket/739>
kumc-bmi/naaccr-tumor-data<https://github.com/kumc-bmi/naaccr-tumor-data>
* DC to look into patient_mapping using item 2300 MRN
wash your hands
…<https://www.cdc.gov/coronavirus/2019-ncov/prepare/prevention.html> wear a
mask and social distance
--
Dan
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