smem is recommended here

Cheers,
Adam

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Senior HPC and Cloud Systems Engineer
The Francis Crick Institute
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On 24 Jul 2017, at 15:21, Peter Childs 
<[email protected]<mailto:[email protected]>> wrote:


top

but ps gives the same value.

[root@dn29<mailto:root@dn29> ~]# ps auww -q 4444
USER       PID %CPU %MEM    VSZ   RSS TTY      STAT START   TIME COMMAND
root      4444  2.7 22.3 10537600 5472580 ?    S<Ll Jul12 466:13 
/usr/lpp/mmfs/bin/mmfsd

Thanks for the help

Peter.


On Mon, 2017-07-24 at 14:10 +0000, Jim Doherty wrote:
How are you identifying  the high memory usage?


On Monday, July 24, 2017 9:30 AM, Peter Childs 
<[email protected]<mailto:[email protected]>> wrote:


I've had a look at mmfsadm dump malloc and it looks to agree with the output 
from mmdiag --memory. and does not seam to account for the excessive memory 
usage.

The new machines do have idleSocketTimout set to 0 from what your saying it 
could be related to keeping that many connections between nodes working.

Thanks in advance

Peter.




[root@dn29<mailto:root@dn29> ~]# mmdiag --memory

=== mmdiag: memory ===
mmfsd heap size: 2039808 bytes


Statistics for MemoryPool id 1 ("Shared Segment (EPHEMERAL)")
           128 bytes in use
   17500049370 hard limit on memory usage
       1048576 bytes committed to regions
             1 number of regions
           555 allocations
           555 frees
             0 allocation failures


Statistics for MemoryPool id 2 ("Shared Segment")
      42179592 bytes in use
   17500049370 hard limit on memory usage
      56623104 bytes committed to regions
             9 number of regions
        100027 allocations
         79624 frees
             0 allocation failures


Statistics for MemoryPool id 3 ("Token Manager")
       2099520 bytes in use
   17500049370 hard limit on memory usage
      16778240 bytes committed to regions
             1 number of regions
             4 allocations
             0 frees
             0 allocation failures


On Mon, 2017-07-24 at 13:11 +0000, Jim Doherty wrote:
There are 3 places that the GPFS mmfsd uses memory  the pagepool  plus 2 shared 
memory segments.   To see the memory utilization of the shared memory segments 
run the command   mmfsadm dump malloc .    The statistics for memory pool id 2 
is where  maxFilesToCache/maxStatCache objects are  and the manager nodes use 
memory pool id 3 to track the MFTC/MSC objects.

You might want to upgrade to later PTF  as there was a PTF to fix a memory leak 
that occurred in tscomm associated with network connection drops.


On Monday, July 24, 2017 5:29 AM, Peter Childs 
<[email protected]<mailto:[email protected]>> wrote:


We have two GPFS clusters.

One is fairly old and running 4.2.1-2 and non CCR and the nodes run
fine using up about 1.5G of memory and is consistent (GPFS pagepool is
set to 1G, so that looks about right.)

The other one is "newer" running 4.2.1-3 with CCR and the nodes keep
increasing in there memory usage, starting at about 1.1G and are find
for a few days however after a while they grow to 4.2G which when the
node need to run real work, means the work can't be done.

I'm losing track of what maybe different other than CCR, and I'm trying
to find some more ideas of where to look.

I'm checked all the standard things like pagepool and maxFilesToCache
(set to the default of 4000), workerThreads is set to 128 on the new
gpfs cluster (against default 48 on the old)

I'm not sure what else to look at on this one hence why I'm asking the
community.

Thanks in advance

Peter Childs
ITS Research Storage
Queen Mary University of London.
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ITS Research Storage
Queen Mary, University of London

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ITS Research Storage
Queen Mary, University of London

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