Can you simply print the values given by the following? cluster = gt.local_clustering(g) loc_cluster = [c for c in cluster] print(loc_cluster)
In my opinion, this is the correct way to calculate local clustering coefficients. Regards Snehal On Wed, Oct 19, 2016 at 5:15 PM, P-M <[email protected]> wrote: > I have computed the local clustering coefficient for my network and then > created a histogram as follows: > > g = gt.load_graph('graph_no_multi.gt') > > #"The clustering coefficient is normalized only for _simple_ graphs, with > at > #most one edge between nodes." > gt.remove_parallel_edges(g) > > #create new property map > clustering = g.new_vertex_property("float") > > #calculate clustering coefficient > gt.local_clustering(g,prop=clustering,undirected=False) > > #Make propery map internal > g.vp.clust = clustering > #Initiliase dictionary containing list of clustering coefficients for given > degree > clust_k_hist={} > for v in g.vertices(): > k = v.out_degree() > c=g.vp.clust[v] > if k in clust_k_hist: > clust_k_hist[k].append(c) > else: > clust_k_hist[k]=[c] > > If I now however type `print max(clust_k_hist[0])` I get an answer of `2` > which surprises me slightly (similarly for `k=1` I get a value of `2`). > Firstly I wasn't expecting a clustering coefficient greater than `1` but > also for a degree of `0` I would expect to find only clustering > coefficients > of `0`. The documentation states that the outdegree is being used in > calculating the local clustering coefficient so I am using the outdegree > for > compiling the histogram. > > Have I gone wrong somewhere? > > > > -- > View this message in context: http://main-discussion-list- > for-the-graph-tool-project.982480.n3.nabble.com/Local- > Clustering-Coefficient-for-k-1-tp4026696p4026772.html > Sent from the Main discussion list for the graph-tool project mailing list > archive at Nabble.com. > _______________________________________________ > graph-tool mailing list > [email protected] > https://lists.skewed.de/mailman/listinfo/graph-tool > -- Snehal Madhukar Shekatkar Pune India
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