On 13.01.2018 17:08, Mátyás Csongor wrote: > Is there an example that uses multiple groups within the graph and draw it > accordingly. I have multiple groups and I would like to draw the graph in a > way that all vertices within each group to be close to each other. I could > not achieve this with a problem that has a known solution, so I thought > maybe it is not possible, or if it is, someone could help me in how I should > try doing it. > > The test problem that I've chosen is to take all amino acids, organize them > into groups according to their properties, and to get to this planar grouping: > https://www.researchgate.net/publication/11265315/figure/fig1/AS:281251018756131@1444066876658/Figure-2-Taylor%27s-Venn-diagram-of-amino-acid-properties-Taylor-argues-Cys-should-appear.png > > I would like some general help ideas, but if someone would like to join me > in this small project, I can share what I've tried until now.
Take a look at the "groups" and "gamma" parameters in sfdp_layout(), as it seems to address what you want. -- Tiago de Paula Peixoto <[email protected]> _______________________________________________ graph-tool mailing list [email protected] https://lists.skewed.de/mailman/listinfo/graph-tool
