In the thread linked (http://main-discussion-list-for-the-graph-tool-project.982480.n3.nabble.com/SBM-on-Dense-Graphs-td4027902.html#a4027907) is written
(Remember to replace mcmc_sweep() with multiflip_mcmc_sweep() in the code above. I had forgotten to make this change the last release...) Does this mean that one should also set "multiflip=True" in mcmc_equilbrate? d > On 11 Feb 2020, at 21:30, Deklan Webster <[email protected]> wrote: > > Thanks, I got it setup. The memory usage is now about 2~GB! > > I was testing with a smaller graph and I noticed the sweeps are much slower > with multiflip. Is this a fundamental tradeoff between speed and memory > usage, or is there some setting to make it faster? > > Thanks > > On Tue, Feb 11, 2020 at 6:11 AM Felix Victor Münch <[email protected]> > wrote: > This thread might answer your question: > > http://main-discussion-list-for-the-graph-tool-project.982480.n3.nabble.com/SBM-on-Dense-Graphs-td4027902.html#a4027907 > > > Cheers, > > > Dr. Felix Victor Münch > Postdoc Researcher > Leibniz Institut for Media Research | Hans-Bredow-Institut (HBI), Hamburg > https://leibniz-hbi.de/ > https://felixvictor.net > > > On Monday, Feb 10, 2020 at 5:30 PM, Deklan Webster <[email protected]> wrote: > I was trying to do a nested degree-corrected SBM on my laptop, but I was > running out of RAM, 14-15GB before stopping with "Killed". The graph is > directed with 20k nodes 2.8m edges. > > Is that a typical amount of memory usage or did I do something wrong? If it's > normal, is there any way for me to work around this such that I can run it on > my computer > _______________________________________________ > graph-tool mailing list > [email protected] > https://lists.skewed.de/mailman/listinfo/graph-tool > > _______________________________________________ > graph-tool mailing list > [email protected] > https://lists.skewed.de/mailman/listinfo/graph-tool > _______________________________________________ > graph-tool mailing list > [email protected] > https://lists.skewed.de/mailman/listinfo/graph-tool _______________________________________________ graph-tool mailing list [email protected] https://lists.skewed.de/mailman/listinfo/graph-tool
