The changes to handle finding files in other mapsets and to remove confusing messages have been included in spgrass6_0.5-17, now released on CRAN. It checks cleanly against 6.4.0svn, Revision: 35395, so RC2 is good too (this is the svn up number, but the number in Help -> "About GRASS GIS" in the wxpython GUI is lower - any way to harmonise?).

Roger


On Sun, 11 Jan 2009, Roger Bivand wrote:

On Sun, 11 Jan 2009, Markus Neteler wrote:

On Sun, Jan 11, 2009 at 4:48 PM, Roger Bivand <[email protected]> wrote:
On Sat, 10 Jan 2009, Markus Neteler wrote:
On Sat, Jan 10, 2009 at 9:20 PM, Roger Bivand <[email protected]> wrote:
On Sat, 10 Jan 2009, Markus Neteler wrote:
On Sat, Jan 3, 2009 at 11:09 AM, Roger Bivand <[email protected]> wrote:
...
This message *is* confusing as it is a warning only. It comes from GDAL:
gdal/frmts/gtiff/geotiff.cpp:                  "SetColorTable() only
supportedfor Byte or UInt16 bands in TIFF format." );

  if( eDataType != GDT_Byte && eDataType != GDT_UInt16 )
  {
      CPLError( CE_Failure, CPLE_NotSupported,
                "SetColorTable() only supported for Byte or UInt16
bands in TIFF format." );
      return CE_Failure;
  }

I suppose there is some trick to suppress it (since it uses the
CPLError function).
I don't know too much about it but found

http://www.gdal.org/ogr/cpl__error_8h.html#ad2b98dd58e4de706a245faddac90403

Just throw stderr stuff to /dev/null (of course problematic with Windows)?

I've "handled" this for some definition of handle by setting -c in the
r.out.gdal call - this was controlling whether colour table writing was
attempted.

ah fine, I didn't think of this possibility.

WARNING: Input raster map contains cells with NULL-value (no-data). The
       value 999 was used to represent no-data values in the input map.
       You can specify nodata value by nodata parameter.
...
http://trac.osgeo.org/grass/changeset/35321

It is in 6.4SVN and 7 SVN and will appear on Monday in 6.4.0RC2.
GRASS 6.3 and older are not affected as r.out.gdal wasn't there.


With 6.4SVN I now get:

library(spgrass6)

Loading required package: sp
Loading required package: rgdal
Geospatial Data Abstraction Library extensions to R successfully loaded
Loaded GDAL runtime: GDAL 1.6.0, released 2008/12/04
GDAL_DATA: /home/rsb/lib/r_libs/rgdal/gdal
Loaded PROJ.4 runtime: Rel. 4.6.1, 21 August 2008
PROJ_LIB: /home/rsb/lib/r_libs/rgdal/proj
GRASS GIS interface loaded with GRASS version: 6.4.0svn
and location: nc_spm_08

elev <- readRAST6("elev_state_500m")

raster/current region mismatch detected in components:

may I suggest cosmetics:
raster map/current region mismatch detected in components:
?

Committed - so you'll see this when you get to it, thanks.

I'll worry about the 6.4 - 7.0 plugin issue when it becomes more pressing for me - for now I'll avoid 7.0.

Best wishes,

Roger


          cols            rows origin.northing  origin.easting
         FALSE           FALSE           FALSE           FALSE
set plugin=TRUE to override; continuing with plugin=FALSE
/home/rsb/topics/grassdata/nc_spm_08/rsb/.tmp/reclus2/elev_state_500m has
GDAL driver GTiff
and has 620 rows and 1630 columns

elev <- readRAST6("elev_state_500m", ignore.stderr=TRUE)


I've committed to sourceforge CVS, could you confirm that this is OK?

I'll do (tonight I won't manage and I got the mail only now due to
osgeo mail reflector stuck for some hours).
Hope tomorrow morning as first thing.

How does one manage the plugin links in a mixed 6.4/7.0 setting? I tried 7.0
first, but I think there was a problem:

ERROR: Incompatible library version for module

which crashed R/rgdal. The plugin was built against 6.4RC1, so probably two
different library versions had a disagreement.

Oh, this is really a problem and needs to be discussed on grass-dev
or via trac ticket. Glynn had added this test which will cause troubles
here. Maybe there is a workaround possible.

Thanks for your efforts.

Best wishes,
Markus




--
Roger Bivand
Economic Geography Section, Department of Economics, Norwegian School of
Economics and Business Administration, Helleveien 30, N-5045 Bergen,
Norway. voice: +47 55 95 93 55; fax +47 55 95 95 43
e-mail: [email protected]

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