Thanks Rainer,
i also thought that my problems occured as a result of our server being out of date, but as i got the same error with R 2.11 on my laptop i didn't really believe it. I upgraded to R 2.13.1 now and everything works just fine.

Bye,
Levent

Am 21.09.2011 16:28, schrieb Rainer M Krug:
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On 21/09/11 16:22, Levent Burggraef wrote:
Hi list,
Hi

Your version of R is very old, and I guess that is the problem. The
actual version of R is 2.13.1 and the actual version of spgrass6 is 0.7-4.

Could you please update (or ask you system admin) to update, as I
guess that the problem is an incompatiility between spgrass6 and R.

Please compare: the command system() takes in the actuial version the
following parameter, and I assume that it did not include
ignore.stdout in your version - so updating is the only version.

  system(command, intern = FALSE,
             ignore.stdout = FALSE, ignore.stderr = FALSE,
             wait = TRUE, input = NULL, show.output.on.console = TRUE,
             minimized = FALSE, invisible = TRUE)


Cheers,

Rainer


i posted this message in the GRASS user mailing list first and was
asked to post again here. I'm running GRASS 6.4.0 and R 2.9.1 with
the package Spgrass6. I work on SUSE Linux Enterprise Server 10.

I also tried the same packages (with GRASS version 6.4.0+42329
(2010) ) and commands on my Ubuntu 10.10. laptop and got exactly
the same error message.

After starting an R session in GRASS, loading Spgrass6 and running
a command, i get an error somehow related to the R command
“syscmd”, reporting unused arguments. The example below relates to
gmeta6(), but it happens with any command from Spgrass6.

---------------
library(spgrass6)
Lade nötiges Paket: sp Lade nötiges Paket: rgdal Geospatial Data
Abstraction Library extensions to R successfully loaded Loaded GDAL
runtime: GDAL 1.6.3, released 2009/11/19 Path to GDAL shared files:
/usr/share/gdal Loaded PROJ.4 runtime: Rel. 4.7.1, 23 September
2009 Path to PROJ.4 shared files: (autodetected) Lade nötiges
Paket: XML GRASS GIS interface loaded with GRASS version: GRASS
6.4.0svn (2009) and location: projekt_sued

gmeta6()
Fehler in system(syscmd, intern = intern, ignore.stderr =
ignore.stderr,  : unbenutzte(s) Argument(e) (ignore.stdout =
Sys_ignore.stdout) --------------

Thanks for your help, Levent





- -- Rainer M. Krug, PhD (Conservation Ecology, SUN), MSc (Conservation
Biology, UCT), Dipl. Phys. (Germany)

Centre of Excellence for Invasion Biology
Stellenbosch University
South Africa

Tel :       +33 - (0)9 53 10 27 44
Cell:       +33 - (0)6 85 62 59 98
Fax :       +33 - (0)9 58 10 27 44

Fax (D):    +49 - (0)3 21 21 25 22 44

email:      [email protected]

Skype:      RMkrug
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