I have faced a similar issue.Looks like maybe the 
elasticsearch_discovery_zen_ping_unicast_hosts configuration is incorrect. 
Please look at that. Anyways also have created the below issue 
https://github.com/Graylog2/graylog2-server/issues/2929 as well.

On Thursday, 6 October 2016 13:55:03 UTC-7, John B wrote:
>
> Hi
>
> Version (Docker): graylog2/server:latest
> Version (ES): 2.3.5
>
> I am in the process of setting up a dockerized Graylog environment backed 
> by an ES cluster.
>
> After tinkering with the configuration options, I was able to successfully 
> get Graylog to connect to the ES cluster and create its index. I then shut 
> down the Graylog server, and when I tried to restart it, Graylog would no 
> longer start. Instead, the logs are filled with the following messages. I 
> have tried deleting the index, deleting graylog's data directory, deleting 
> graylog's configuration directory, but it still won't get past this. I have 
> not tried to clear mongodb.
>
> graylog_1 | 2016-10-06 18:32:47,005 INFO : org.elasticsearch.plugins - 
> [graylog-6daa80c9-25b5-49d4-b76c-0722dda2654a] modules [], plugins 
> [graylog-monitor], sites []
> graylog_1 | 2016-10-06 18:32:47,403 INFO : org.elasticsearch.node - 
> [graylog-6daa80c9-25b5-49d4-b76c-0722dda2654a] version[2.3.5], pid[1], 
> build[90f439f/2016-07-27T10:36:52Z]
> graylog_1 | 2016-10-06 18:32:47,403 INFO : org.elasticsearch.node - 
> [graylog-6daa80c9-25b5-49d4-b76c-0722dda2654a] initializing ...
> graylog_1 | 2016-10-06 18:32:47,403 INFO : org.elasticsearch.plugins - 
> [graylog-6daa80c9-25b5-49d4-b76c-0722dda2654a] modules [], plugins 
> [graylog-monitor], sites []
> graylog_1 | 2016-10-06 18:32:48,165 INFO : org.elasticsearch.node - 
> [graylog-6daa80c9-25b5-49d4-b76c-0722dda2654a] version[2.3.5], pid[1], 
> build[90f439f/2016-07-27T10:36:52Z]
> graylog_1 | 2016-10-06 18:32:48,165 INFO : org.elasticsearch.node - 
> [graylog-6daa80c9-25b5-49d4-b76c-0722dda2654a] initializing ...
> graylog_1 | 2016-10-06 18:32:48,165 INFO : org.elasticsearch.plugins - 
> [graylog-6daa80c9-25b5-49d4-b76c-0722dda2654a] modules [], plugins 
> [graylog-monitor], sites []
> graylog_1 | 2016-10-06 18:32:48,455 INFO : org.elasticsearch.node - 
> [graylog-6daa80c9-25b5-49d4-b76c-0722dda2654a] version[2.3.5], pid[1], 
> build[90f439f/2016-07-27T10:36:52Z]
> graylog_1 | 2016-10-06 18:32:48,455 INFO : org.elasticsearch.node - 
> [graylog-6daa80c9-25b5-49d4-b76c-0722dda2654a] initializing ...
> graylog_1 | 2016-10-06 18:32:48,456 INFO : org.elasticsearch.plugins - 
> [graylog-6daa80c9-25b5-49d4-b76c-0722dda2654a] modules [], plugins 
> [graylog-monitor], sites [] 
>

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