Well, Michael beat me to the bit about where the installer detritus was located (which is appropriate since I was going to point to one of his messages).

I've also found in the past that the installer puts the gregoriotex files in odd places and these sometimes get priority over the current version. Specifically, you want to get rid of the copies in /usr/local/texlive/texmf-local/tex and /usr/local/texlive/texmf-local/tex/latex to prevent this. The copy you want to keep is located in /usr/local/texlive/texmf-local/tex/luatex.

You can use the following commands in the terminal to get rid of the unwanted stuff:

sudo rm -r /usr/local/texlive/texmf-local/tex/gregoriotex
sudo rm -r /usr/local/texlive/texmf-local/tex/latex/gregoriotex

Once that's done, you can verify your work by making a blank document with the following two commands in the preamble:

\usepackage{gregoriotex}
\listfiles

When typeset the file list at the end of the console output should show:
gregoriotex.sty    2010/09/27 v2.1 GregorioTeX system.

✝✝✝✝✝✝✝✝✝✝✝✝✝✝✝✝✝✝✝✝✝✝✝✝✝
Br. Samuel, OSB
(R. Padraic Springuel)

PAX ☧ ΧΡΙΣΤΟΣ

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