On 12/5/13 5:38 AM, sunyeping wrote:
Dear gromcas users, I have a receptor-ligand complex pdb file, and I want to
use editconf to generate the receptor pdb file and the ligand pdb file. I use
the following commands:editconf -f _comp0.pdb -o _receptor0.pdb -n
index.ndxeditconf -f _comp0.pdb -o _ligand0.pdb -n index.ndxThe first command
seems to work and I get the receptor pdb file. However, the second command
doesn't work. It gives a "segment fault" information and generate a empty pdb
file. Could anyone tell me what cause this error?

The most likely cause is a malformatted .pdb or .ndx file.



Justin A. Lemkul, Ph.D.
Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalem...@outerbanks.umaryland.edu | (410) 706-7441

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