On Fri, Dec 13, 2013 at 3:38 PM, chem grad <kelly.summ...@usask.ca> wrote:
> Actually... yes, I may have spoken too soon... I can see Gromacs on my > machine, but I am still struggling to get it to run properly. > > I cannot convince cygwin to source the gromacs files properly (well, at > least I think that's the problem). When I enter "luck" into the command > line it returns the "luck: command not found" error message. > > "luck" does not exist any more; it is named "g_luck" now. > Also, both commands I have entered (pdb2gmx and mdrun) have returned the > following error: > > /usr/local/gromacs/bin/pdb2gmx.exe: error while loading shared libraries: > cyggmxpreprocess-8.dll: cannot open shared object file: No such file or > directory > > Maybe I was not as successful as I thought with the install? > > Well, the installation succeeded, but now you likely have to configure your environment to find the libraries. I honestly have no idea on how to do that on Windows. If it were Linux... ;) -Justin -- ========================================== Justin A. Lemkul, Ph.D. Postdoctoral Fellow Department of Pharmaceutical Sciences School of Pharmacy Health Sciences Facility II, Room 601 University of Maryland, Baltimore 20 Penn St. Baltimore, MD 21201 jalem...@outerbanks.umaryland.edu | (410) 706-7441 ========================================== -- Gromacs Users mailing list * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/GMX-Users_List before posting! * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists * For (un)subscribe requests visit https://maillist.sys.kth.se/mailman/listinfo/gromacs.org_gmx-users or send a mail to gmx-users-requ...@gromacs.org.