On 1/15/14, 4:18 PM, rajat desikan wrote:
Hi Justin,
Thanks for the reply. So, must I use a separate .mdp file with infinite cutoffs
for both vdw and coulomb to get all the LR interactions correctly? Can you give
me specific pointers about the settings?


Infinite cutoffs, zero steps, don't use constraints (so the coordinates don't change), then follow http://www.gromacs.org/Documentation/How-tos/Single-Point_Energy.

-Justin

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Justin A. Lemkul, Ph.D.
Postdoctoral Fellow

Department of Pharmaceutical Sciences
School of Pharmacy
Health Sciences Facility II, Room 601
University of Maryland, Baltimore
20 Penn St.
Baltimore, MD 21201

jalem...@outerbanks.umaryland.edu | (410) 706-7441

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